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Journal Articles

Bio-active lipids protect against immune-related adverse events due to immune checkpoint blockade therapy

Priyanka Saminathan, Ian T Mathews, Mir Henglin, Mingyue Liu, Kysha Mercader, Serena J.D.W Chee, Allison Campbell, Saumya Tiwari, Jeramie Watrous, Martina Dicker, Khoi Dao, Mahan Najhawan, Lily Quach, Thien-Tu Catherine Nguyen, Namratha Nadig, Camille Fang, Pandurangan Vijayanand, Leo A.B. Joosten, Roy Decker, Abijit Patel, Mihai Netea, Tao Long, Pan Zheng, Mitchell Kronenburg, Sandip Pravin Patel, Christian Ottensmeier, Susan M Kaech, Susan Cheng, Mohit Jain, Sonia Sharma
Journal: The Journal of Immunology
J Immunol (2023) 210 (1_Supplement): 66.03.
https://doi.org/10.4049/jimmunol.210.Supp.66.03
Published: 01 May 2023
View article titled, Bio-active lipids protect against immune-related adverse events due to immune checkpoint blockade therapy
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Journal Articles

Metabolic fuel choices control MAIT cell functions at homeostasis and after infection

Thomas Riffelmacher, Mallory Murray Paynich, Shilpi Chandra, Chantal Wientjens, Gregory Seumois, Pandurangan Vijayanand, Mitchell Kronenberg
Journal: The Journal of Immunology
J Immunol (2022) 208 (1_Supplement): 55.10.
https://doi.org/10.4049/jimmunol.208.Supp.55.10
Published: 01 May 2022
View article titled, Metabolic fuel choices control MAIT cell functions at homeostasis and after infection
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Distinct super-enhancer elements differentially control Il2ra gene expression in a cell-type specific fashion

Rosanne Spolski, Peng Li, Vivek Chandra, Boyoung Shin, Chengyu Liu, Janksuk Oh, Erin West, Pandurangan Vijayanand, Ellen Rothenberg, Warren Leonard
Journal: The Journal of Immunology
J Immunol (2022) 208 (1_Supplement): 45.04.
https://doi.org/10.4049/jimmunol.208.Supp.45.04
Published: 01 May 2022
View article titled, Distinct super-enhancer elements differentially control <em>Il2ra</em> gene expression in a cell-type specific fashion
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Profiling the myeloid compartment of PBMC in active tuberculosis reveals substantial changes in CD14+ cells and upregulation of CD16 in pro-inflammatory dendritic cells

Julie G Burel, Hannah Hillman, Nabeela Khan, Akul Singhania, Paige Dubelko, Ferran Soldevilla Casals, Rashmi Tippalagama, Aruna D deSilva, Thomas J Scriba, Randy Taplitz, Gregory Seumois, Pandurangan Vijayanand, Catherine C Hedrick, Alessandro Sette, Bjoern Peters
Journal: The Journal of Immunology
J Immunol (2022) 208 (1_Supplement): 161.02.
https://doi.org/10.4049/jimmunol.208.Supp.161.02
Published: 01 May 2022
View article titled, Profiling the myeloid compartment of PBMC in active tuberculosis reveals substantial changes in CD14<sup>+</sup> cells and upregulation of CD16 in pro-inflammatory dendritic cells
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Journal Articles

From genetic variants to diseases: the role of LACC1 in T cells

Yingcong Li, Vivek Chandra, Pandurangan Vijayanand, Mitchell Kronenberg
Journal: The Journal of Immunology
J Immunol (2022) 208 (1_Supplement): 160.07.
https://doi.org/10.4049/jimmunol.208.Supp.160.07
Published: 01 May 2022
View article titled, From genetic variants to diseases: the role of <em>LACC1</em> in T cells
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Cytotoxic CD4+ tissue-resident memory T cells are associated with asthma severity.

Sara Herrera de la Mata, Ciro Ramírez-Suástegui, Heena Mistry, Mohammad A. Kyyaly, Hayley Simon, Shu Liang, Laurie Lau, Clair Barber, Monalisa Mondal, Syed Hasan Arshad, Ramesh J. Kurukulaaratchy, Pandurangan Vijayanand, Grégory Seumois
Journal: The Journal of Immunology
J Immunol (2022) 208 (1_Supplement): 109.09.
https://doi.org/10.4049/jimmunol.208.Supp.109.09
Published: 01 May 2022
View article titled, Cytotoxic CD4+ tissue-resident memory T cells are associated with asthma severity.
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Journal Articles

Thymus-Derived CD4+CD8+ Cells Reside in Mediastinal Adipose Tissue and the Aortic Arch

Holger Winkels, Yanal Ghosheh, Kouji Kobiyama, William B. Kiosses, Marco Orecchioni, Erik Ehinger, Vasantika Suryawanshi, Sara Herrera-De La Mata, Paola Marchovecchio, Thomas Riffelmacher, Nicolas Thiault, Mitchell Kronenberg, Dennis Wolf, Gregory Seumois, Pandurangan Vijayanand, Klaus Ley
Journal: The Journal of Immunology
J Immunol (2021) 207 (11): 2720–2732.
https://doi.org/10.4049/jimmunol.2100208
Published: 01 December 2021
View article titled, Thymus-Derived CD4<sup>+</sup>CD8<sup>+</sup> Cells Reside in Mediastinal Adipose Tissue and the Aortic Arch
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Includes: Supplementary data
Journal Articles

HLA-DR Marks Recently Divided Antigen-Specific Effector CD4 T Cells in Active Tuberculosis Patients

Rashmi Tippalagama, Akul Singhania, Paige Dubelko, Cecilia S. Lindestam Arlehamn, Austin Crinklaw, Mikhail Pomaznoy, Gregory Seumois, Aruna D. deSilva, Sunil Premawansa, Dhammika Vidanagama, Bandu Gunasena, N. D. Suraj Goonawardhana, Dinuka Ariyaratne, Thomas J. Scriba, Robert H. Gilman, Mayuko Saito, Randy Taplitz, Pandurangan Vijayanand, Alessandro Sette, Bjoern Peters, Julie G. Burel
Journal: The Journal of Immunology
J Immunol (2021) 207 (2): 523–533.
https://doi.org/10.4049/jimmunol.2100011
Published: 15 July 2021
View article titled, HLA-DR Marks Recently Divided Antigen-Specific Effector CD4 T Cells in Active Tuberculosis Patients
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Includes: Supplementary data
Journal Articles

Connecting GWAS SNPs to Target Genes in primary human immune cell types

Vivek Chandra, Sourya Bhattacharyya, Benjamin J. Schmiedel, Ariel Madrigal, Cristian Gonzalez-Colin, Stephanie Fotsing, Mitchell Kronenberg, Bjoern Peters, Ferhat Ay, Pandurangan Vijayanand
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 145.36.
https://doi.org/10.4049/jimmunol.204.Supp.145.36
Published: 01 May 2020
View article titled, Connecting GWAS SNPs to Target Genes in primary human immune cell types
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Journal Articles

Late-rising CD4 T cells show dramatic control of cytomegalovirus persistence

Gaelle Genevieve Alice Picarda, Simon Brunel, Raima Ghosh, Ankan Gupta, Jason Greenbaum, Gregory Seumois, Michael Croft, Pandurangan Vijayanand, Chris A Benedict
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 247.2.
https://doi.org/10.4049/jimmunol.204.Supp.247.2
Published: 01 May 2020
View article titled, Late-rising CD4 T cells show dramatic control of cytomegalovirus persistence
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The Transcription Factors Thpok And Runx3 Identify Two Distinct CD4−CD8− Double Negative T Cell Populations And Respectively Define Their Commitment In The Helper Or Cytotoxic Fate

Nicolas Thiault, Greet Verstichel, Gregory Seumois, Pandurangan Vijayanand, Mitchell Kronenberg, Hilde Cheroutre
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 223.7.
https://doi.org/10.4049/jimmunol.204.Supp.223.7
Published: 01 May 2020
View article titled, The Transcription Factors Thpok And Runx3 Identify Two Distinct CD4<sup>−</sup>CD8<sup>−</sup> Double Negative T Cell Populations And Respectively Define Their Commitment In The Helper Or Cytotoxic Fate
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Journal Articles

Connecting metabolism to inflammation: the role of LACC1 in inflammatory diseases

Yingcong Li, Vivek Chandra, Pandurangan Vijayanand, Mitchell Kronenberg
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 224.37.
https://doi.org/10.4049/jimmunol.204.Supp.224.37
Published: 01 May 2020
View article titled, Connecting metabolism to inflammation: the role of <em>LACC1</em> in inflammatory diseases
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Journal Articles

CD4 and CD8 double positive T cell progenitors in mediastinal adipose tissue and the aortic arch differentiate to CD4 T cells

Holger Winkels, Yanal Ghosheh, Kouji Kobiyama, William B Kiosses, Paola Marcovecchio, Marco Orecchioni, Dennis Wolf, Nicolas Thiault, Gregory Seumois, Pandurangan Vijayanand, Klaus Ley
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 61.4.
https://doi.org/10.4049/jimmunol.204.Supp.61.4
Published: 01 May 2020
View article titled, CD4 and CD8 double positive T cell progenitors in mediastinal adipose tissue and the aortic arch differentiate to CD4 T cells
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Journal Articles

The importance of distinguishing cell-cell complexes from singlets in flow cytometry and single-cell sorting: a case for an image-based cell sorter

Julie G Burel, Mikhail Pomaznoy, Cecilia S Lindestam Arlehamn, Gregory Seumois, Pandurangan Vijayanand, Alessandro Sette, Bjoern Peters
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 86.10.
https://doi.org/10.4049/jimmunol.204.Supp.86.10
Published: 01 May 2020
View article titled, The importance of distinguishing cell-cell complexes from singlets in flow cytometry and single-cell sorting: a case for an image-based cell sorter
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Single cell sequence analysis reveals mouse MAIT cell diversity at steady state and after infection

Shilpi Chandra, Ciro Ramirez, Gabriel Ascui-Gac, Gregory Seumois, Goo-Young Seo, Hayley Simon, Nadine Hartmann, Mallory Paynich Murray, Pandurangan Vijayanand, Mitchell Kronenberg
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 76.9.
https://doi.org/10.4049/jimmunol.204.Supp.76.9
Published: 01 May 2020
View article titled, Single cell sequence analysis reveals mouse MAIT cell diversity at steady state and after infection
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Human Eosinophils Express a Distinct Gene Expression Program in Response to IL-3 Compared with Common β-Chain Cytokines IL-5 and GM-CSF

Ryan K. Nelson, Howard Brickner, Bharat Panwar, Ciro Ramírez-Suástegui, Sara Herrera-de la Mata, Neiman Liu, Damaris Diaz, Laura E. Crotty Alexander, Ferhat Ay, Pandurangan Vijayanand, Grégory Seumois, Praveen Akuthota
Journal: The Journal of Immunology
J Immunol (2019) 203 (2): 329–337.
https://doi.org/10.4049/jimmunol.1801668
Published: 15 July 2019
View article titled, Human Eosinophils Express a Distinct Gene Expression Program in Response to IL-3 Compared with Common β-Chain Cytokines IL-5 and GM-CSF
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Includes: Supplementary data
Journal Articles

Identification of distinct highly pathogenic allergen-specific T cells in common allergy and asthma

Gregory Seumois, Ciro Ramirez Suastegui, Benjamin J Shmiedel, Shu Liang, Veronique Shulten, Bharat Panwar, Ariel Madrigal, Alessandro Sette, Bjoern Peters, Pandurangan Vijayanand
Journal: The Journal of Immunology
J Immunol (2019) 202 (1_Supplement): 186.6.
https://doi.org/10.4049/jimmunol.202.Supp.186.6
Published: 01 May 2019
View article titled, Identification of distinct highly pathogenic allergen-specific T cells in common allergy and asthma
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Database of Immune Cell EQTLs, Expression, Epigenomics

Brendan Ha, Jason A Greenbaum, Benjamin J Shmiedel, Divya Singh, Ariel Madrigal, Alan G Valdovino-Gonzalez, Brandie M White, Jose Zapardiel-Gonzalo, Gokmen Altay, Graham McVicker, Gregory Seumois, Anjana Rao, Mitchell Kronenberg, Pandurangan Vijayanand, Bjoern Peters
Journal: The Journal of Immunology
J Immunol (2019) 202 (1_Supplement): 131.18.
https://doi.org/10.4049/jimmunol.202.Supp.131.18
Published: 01 May 2019
View article titled, Database of Immune Cell EQTLs, Expression, Epigenomics
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Journal Articles

Improving expression estimates of HLA alleles in NGS data using personalized genomic sequences and its effect on eQTL mapping

Austin Crinklaw, Swapnil Mahajan, Mikhail Pomaznoy, Alessandro Sette, Pandurangan Vijayanand, Bjoern Peters
Journal: The Journal of Immunology
J Immunol (2019) 202 (1_Supplement): 131.27.
https://doi.org/10.4049/jimmunol.202.Supp.131.27
Published: 01 May 2019
View article titled, Improving expression estimates of HLA alleles in NGS data using personalized genomic sequences and its effect on eQTL mapping
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Identification of new T Cell Epitopes in the mold aeroallergen Aspergillus fumigatus

Luise Sternberg, Gregory Seumois, Sinu Paul, John Sidney, Véronique MJ Schulten, Alessandro Sette, Pandurangan Vijayanand, Bjoern Peters
Journal: The Journal of Immunology
J Immunol (2019) 202 (1_Supplement): 120.23.
https://doi.org/10.4049/jimmunol.202.Supp.120.23
Published: 01 May 2019
View article titled, Identification of new T Cell Epitopes in the mold aeroallergen <em>Aspergillus fumigatus</em>
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