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Rafi Ahmed
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Journal Articles

Early Generation and Anatomical Commitment of Stem-like CD8 T cells

Daniel Thomas McManus, Christopher Medina, Ewelina Sobierajska, Maria A Cardenas, Nataliya Prokhnevska, Masao Hashimoto, Tahseen Nasti, Rajesh Valanparambil, James Ross, Amanda Gill, Christopher D Scharer, Haydn Kissick, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2023) 210 (1_Supplement): 239.08.
https://doi.org/10.4049/jimmunol.210.Supp.239.08
Published: 01 May 2023
View article titled, Early Generation and Anatomical Commitment of Stem-like CD8 T cells
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Journal Articles

Evaluation of Cellular and Serological Responses to Acute SARS-CoV-2 Infection Demonstrates the Functional Importance of the Receptor-Binding Domain

In Special Collection:
COVID-19, SARS, and MERS Articles
Grace Mantus, Lindsay E. Nyhoff, Robert C. Kauffman, Venkata Viswanadh Edara, Lilin Lai, Katharine Floyd, Pei-Yong Shi, Vineet D. Menachery, Srilatha Edupuganti, Erin M. Scherer, Ariel Kay, Nina McNair, Evan J. Anderson, Nadine Rouphael, Rafi Ahmed, Mehul S. Suthar, Jens Wrammert
Journal: The Journal of Immunology
J Immunol (2021) 206 (11): 2605–2613.
https://doi.org/10.4049/jimmunol.2001420
Published: 01 June 2021
View article titled, Evaluation of Cellular and Serological Responses to Acute SARS-CoV-2 Infection Demonstrates the Functional Importance of the Receptor-Binding Domain
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Includes: Supplementary data
Journal Articles

Diminished monocyte response in severe COVID-19 patients.

In Special Collection:
COVID-19, SARS, and MERS Articles
Meredith E Davis-Gardner, Venkata Edara, Lilin Lai, Fengzhi Jin, Katharine Floyd, Lindsay Nyhoff, Grace Mantus, Max Adelman, Kathryn Pellegrini, Tatiana Chirkova, Haydn Kissick, Steven Bosinger, Larry Anderson, Nadine Rouphael, Rafi Ahmed, Jens Wrammert, Arash Grakoui, Mehul S Suthar
Journal: The Journal of Immunology
J Immunol (2021) 206 (1_Supplement): 110.21.
https://doi.org/10.4049/jimmunol.206.Supp.110.21
Published: 01 May 2021
View article titled, Diminished monocyte response in severe COVID-19 patients.
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Journal Articles

PD-1 blockade later but not at post-transplant attenuates chronic graft-versus-host disease

Stephanie Rhee, Ethan George Aguilar, Katelyn Paz, Ryan Flynn, Juhi Kuchroo, Peter Sage, Arlene H Sharpe, Gordon J Freeman, Rafi Ahmed, Bruce R Blazar
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 87.8.
https://doi.org/10.4049/jimmunol.204.Supp.87.8
Published: 01 May 2020
View article titled, PD-1 blockade later but not at post-transplant attenuates chronic graft-versus-host disease
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Journal Articles

Mechanism of T cell mediated hemorrhagic disease during LCMV infection

Evelyn Luna, Megan McAfee, Joshua Carmen, Hannah Canter, Rafi Ahmed, Philip D Greenberg, Joseph N Blattman
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 94.16.
https://doi.org/10.4049/jimmunol.204.Supp.94.16
Published: 01 May 2020
View article titled, Mechanism of T cell mediated hemorrhagic disease during LCMV infection
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Journal Articles

Dissecting human, ferret, and murine antibody and B cell responses to generate a broadly protective synthetic influenza virus hemagglutinin

Hyunsuh Kim, Jennifer DeBeauchamp, Evelyn Stigger, Ali Ellebedy, Adam Rubrum, Rabeh El-Shesheny, Jeri Crumpton, Christina Kackos, Paul G Thomas, Miguela Caniza, John DeVincenzo, Rafi Ahmed, Richard J Webby
Journal: The Journal of Immunology
J Immunol (2020) 204 (1_Supplement): 245.5.
https://doi.org/10.4049/jimmunol.204.Supp.245.5
Published: 01 May 2020
View article titled, Dissecting human, ferret, and murine antibody and B cell responses to generate a broadly protective synthetic influenza virus hemagglutinin
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Journal Articles

Characterization of varicella zoster virus-specific monoclonal antibodies

Nicole L Sullivan, Morgan Monslow, Janet Sei, Eberhard Durr, Cathy Chang, Megan Mccausland, Nadine Rouphael, Bali Pulendran, Rafi Ahmed, Kalpit A Vora
Journal: The Journal of Immunology
J Immunol (2017) 198 (1_Supplement): 73.1.
https://doi.org/10.4049/jimmunol.198.Supp.73.1
Published: 01 May 2017
View article titled, Characterization of varicella zoster virus-specific monoclonal antibodies
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Journal Articles

T cell exhaustion is Reinforced by Progressive De novo DNA Methylation Programming

Ben A Youngblood, Hazem E. Ghoneim, Hossam Aly Abdelsamed, Robert Carter, Jeffery Scott Hale, Eunseon Ahn, Sejin Im, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2016) 196 (1_Supplement): 214.4.
https://doi.org/10.4049/jimmunol.196.Supp.214.4
Published: 01 May 2016
View article titled, T cell exhaustion is Reinforced by Progressive De novo DNA Methylation Programming
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Journal Articles

Understanding heterogeneous CTL responses to the yellow fever vaccine using mathematical models.

James R Moore, Rustom Antia, Rama Akondy, Jonathan Jia, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2016) 196 (1_Supplement): 80.4.
https://doi.org/10.4049/jimmunol.196.Supp.80.4
Published: 01 May 2016
View article titled, Understanding heterogeneous CTL responses to the yellow fever vaccine using mathematical models.
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Journal Articles

Tbet suppresses TH17 differentiation during viral infection

J Scott Hale, Ata Ur Rasheed Mohammed, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2016) 196 (1_Supplement): 79.4.
https://doi.org/10.4049/jimmunol.196.Supp.79.4
Published: 01 May 2016
View article titled, Tbet suppresses TH17 differentiation during viral infection
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Journal Articles

Masking of antigenic epitopes by antibodies shapes the humoral immune response to influenza

Veronika I Zarnitsyna, Ali H Ellebedy, Carl Davis, Joshy Jacob, Rafi Ahmed, Rustom Antia
Journal: The Journal of Immunology
J Immunol (2016) 196 (1_Supplement): 80.6.
https://doi.org/10.4049/jimmunol.196.Supp.80.6
Published: 01 May 2016
View article titled, Masking of antigenic epitopes by antibodies shapes the humoral immune response to influenza
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Journal Articles

Cutting Edge: miR-17-92 Is Required for Both CD4 Th1 and T Follicular Helper Cell Responses during Viral Infection

Tuoqi Wu, Andreas Wieland, Judong Lee, J. Scott Hale, Jin-Hwan Han, Xiaojin Xu, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2015) 195 (6): 2515–2519.
https://doi.org/10.4049/jimmunol.1500317
Published: 15 September 2015
View article titled, Cutting Edge: miR-17-92 Is Required for Both CD4 Th1 and T Follicular Helper Cell Responses during Viral Infection
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Includes: Supplementary data
Journal Articles

Characterization of long-lived human memory CD8 T cells specific to yellow fever virus (LYM5P.707)

Shu Yang, Rama Akondy, Ben Youngblood, Srilatha Edupuganti, Mark Mulligan, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2015) 194 (1_Supplement): 134.12.
https://doi.org/10.4049/jimmunol.194.Supp.134.12
Published: 01 May 2015
View article titled, Characterization of long-lived human memory CD8 T cells specific to yellow fever virus (LYM5P.707)
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Journal Articles

LCMV-specific CD4 T cells induce immunopathology and impair immune protection following chronic LCMV infection (VIR1P.1132)

Pablo Penaloza-MacMaster, Daniel Barber, E. Wherry, Nicholas Provine, Jeffrey E. Teigler, Lily Parenteau, Stephen Blackmore, Erica Borducchi, Rafael Larocca, Kathleen Yates, Hao Shen, W. Haining, Rami Sommerstein, Daniel Pinschewer, Rafi Ahmed, Dan Barouch
Journal: The Journal of Immunology
J Immunol (2015) 194 (1_Supplement): 74.9.
https://doi.org/10.4049/jimmunol.194.Supp.74.9
Published: 01 May 2015
View article titled, LCMV-specific CD4 T cells induce immunopathology and impair immune protection following chronic LCMV infection (VIR1P.1132)
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Journal Articles

Characterization of activated B cells, a novel antigen-specific B cell population that emerges in blood after infection and vaccination in humans (VAC11P.1062)

Ali Ellebedy, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2015) 194 (1_Supplement): 212.2.
https://doi.org/10.4049/jimmunol.194.Supp.212.2
Published: 01 May 2015
View article titled, Characterization of activated B cells, a novel antigen-specific B cell population that emerges in blood after infection and vaccination in humans (VAC11P.1062)
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Journal Articles

Dnmt3a mediated de novo DNA methylation programming enforces T cell exhaustion (IRM14P.451)

Ben Youngblood, Scott Hale, Eunseon Ahn, Sejin Im, Hazem Ghoneim, Hossam Abdelsamed, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2015) 194 (1_Supplement): 198.11.
https://doi.org/10.4049/jimmunol.194.Supp.198.11
Published: 01 May 2015
View article titled, Dnmt3a mediated de novo DNA methylation programming enforces T cell exhaustion (IRM14P.451)
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Journal Articles

Differential role of B7 co-stimulation on B cells and dendritic cells for Th1 and Tfh differentiation (LYM8P.631)

Alice Kamphorst, Masashi Watanabe, Koichi Araki, Mohammed Ata Ur Rasheed, Carl Davis, Shu Yang, Bogumila Konieczny, Richard Hodes, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2015) 194 (1_Supplement): 201.7.
https://doi.org/10.4049/jimmunol.194.Supp.201.7
Published: 01 May 2015
View article titled, Differential role of B7 co-stimulation on B cells and dendritic cells for Th1 and Tfh differentiation (LYM8P.631)
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Journal Articles

NF-κB Regulates PD-1 Expression in Macrophages

Alexander P. R. Bally, Peiyuan Lu, Yan Tang, James W. Austin, Christopher D. Scharer, Rafi Ahmed, Jeremy M. Boss
Journal: The Journal of Immunology
J Immunol (2015) 194 (9): 4545–4554.
https://doi.org/10.4049/jimmunol.1402550
Published: 01 May 2015
View article titled, NF-κB Regulates PD-1 Expression in Macrophages
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Includes: Supplementary data
Journal Articles

STAT3, STAT4, NFATc1, and CTCF Regulate PD-1 through Multiple Novel Regulatory Regions in Murine T Cells

James W. Austin, Peiyuan Lu, Parimal Majumder, Rafi Ahmed, Jeremy M. Boss
Journal: The Journal of Immunology
J Immunol (2014) 192 (10): 4876–4886.
https://doi.org/10.4049/jimmunol.1302750
Published: 15 May 2014
View article titled, STAT3, STAT4, NFATc1, and CTCF Regulate PD-1 through Multiple Novel Regulatory Regions in Murine T Cells
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Includes: Supplementary data
Journal Articles

Translational control of memory CD8 T cell differentiation (LYM4P.752)

Koichi Araki, Bogumila Konieczny, Masahiro Morita, Nahum Sonenberg, Rafi Ahmed
Journal: The Journal of Immunology
J Immunol (2014) 192 (1_Supplement): 65.9.
https://doi.org/10.4049/jimmunol.192.Supp.65.9
Published: 01 May 2014
View article titled, Translational control of memory CD8 T cell differentiation (LYM4P.752)
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