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Journal Articles

The Minimal Information about MHC Multimers (MIAMM)

Randi J Vita, Apurva Mody, James A Overton, Soren Buus, Stephen T Haley, Richard A Willis, Alessandro Sette, Vamsee Mallajosyula, Bjoern Peters, John D Altman
Journal: The Journal of Immunology
J Immunol (2022) 208 (1_Supplement): 173.02.
https://doi.org/10.4049/jimmunol.208.Supp.173.02
Published: 01 May 2022
View article titled, The Minimal Information about MHC Multimers (MIAMM)
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Journal Articles

Minimal Information about MHC Multimers (MIAMM)

Randi Vita, Apurva Mody, James A. Overton, Soren Buus, Stephen T. Haley, Alessandro Sette, Vamsee Mallajosyula, Mark M. Davis, Dale L. Long, Richard A. Willis, Bjoern Peters, John D. Altman
Journal: The Journal of Immunology
J Immunol (2022) 208 (3): 531–537.
https://doi.org/10.4049/jimmunol.2100961
Published: 01 February 2022
View article titled, Minimal Information about MHC Multimers (MIAMM)
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Integral Use of Immunopeptidomics and Immunoinformatics for the Characterization of Antigen Presentation and Rational Identification of BoLA-DR–Presented Peptides and Epitopes

Andressa Fisch, Birkir Reynisson, Lindert Benedictus, Annalisa Nicastri, Deepali Vasoya, Ivan Morrison, Søren Buus, Beatriz Rossetti Ferreira, Isabel Kinney Ferreira de Miranda Santos, Nicola Ternette, Tim Connelley, Morten Nielsen
Journal: The Journal of Immunology
J Immunol (2021) 206 (10): 2489–2497.
https://doi.org/10.4049/jimmunol.2001409
Published: 15 May 2021
View article titled, Integral Use of Immunopeptidomics and Immunoinformatics for the Characterization of Antigen Presentation and Rational Identification of BoLA-DR–Presented Peptides and Epitopes
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Includes: Supplementary data
Journal Articles

HLA Class II Specificity Assessed by High-Density Peptide Microarray Interactions

Thomas Osterbye, Morten Nielsen, Nadine L. Dudek, Sri H. Ramarathinam, Anthony W. Purcell, Claus Schafer-Nielsen, Soren Buus
Journal: The Journal of Immunology
J Immunol (2020) 205 (1): 290–299.
https://doi.org/10.4049/jimmunol.2000224
Published: 01 July 2020
View article titled, HLA Class II Specificity Assessed by High-Density Peptide Microarray Interactions
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Includes: Supplementary data
Journal Articles

Using MHC Binding Assays to Investigate HLA-Dependent Drug Directed Immune Responses

Thomas Kaever, Imir G Metushi, Rebecca Pavlos, John Sidney, David A Ostrov, Soren Buus, Alec Redwood, Alessandro Sette, Donald F Hunt, Elizabeth J Phillips, Bjoern Peters
Journal: The Journal of Immunology
J Immunol (2017) 198 (1_Supplement): 55.42.
https://doi.org/10.4049/jimmunol.198.Supp.55.42
Published: 01 May 2017
View article titled, Using MHC Binding Assays to Investigate HLA-Dependent Drug Directed Immune Responses
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Pan-Specific Prediction of Peptide–MHC Class I Complex Stability, a Correlate of T Cell Immunogenicity

Michael Rasmussen, Emilio Fenoy, Mikkel Harndahl, Anne Bregnballe Kristensen, Ida Kallehauge Nielsen, Morten Nielsen, Søren Buus
Journal: The Journal of Immunology
J Immunol (2016) 197 (4): 1517–1524.
https://doi.org/10.4049/jimmunol.1600582
Published: 15 August 2016
View article titled, Pan-Specific Prediction of Peptide–MHC Class I Complex Stability, a Correlate of T Cell Immunogenicity
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Includes: Supplementary data
Journal Articles

Extensive CD4 and CD8 T Cell Cross-Reactivity between Alphaherpesviruses

Lichen Jing, Kerry J. Laing, Lichun Dong, Ronnie M. Russell, Russell S. Barlow, Juergen G. Haas, Meena S. Ramchandani, Christine Johnston, Soren Buus, Alec J. Redwood, Katie D. White, Simon A. Mallal, Elizabeth J. Phillips, Christine M. Posavad, Anna Wald, David M. Koelle
Journal: The Journal of Immunology
J Immunol (2016) 196 (5): 2205–2218.
https://doi.org/10.4049/jimmunol.1502366
Published: 01 March 2016
View article titled, Extensive CD4 and CD8 T Cell Cross-Reactivity between Alphaherpesviruses
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Includes: Supplementary data
Journal Articles

CD8+ TCR Bias and Immunodominance in HIV-1 Infection

Henrik N. Kløverpris, Reuben McGregor, James E. McLaren, Kristin Ladell, Mikkel Harndahl, Anette Stryhn, Jonathan M. Carlson, Catherine Koofhethile, Bram Gerritsen, Can Keşmir, Fabian Chen, Lynn Riddell, Graz Luzzi, Alasdair Leslie, Bruce D. Walker, Thumbi Ndung’u, Søren Buus, David A. Price, Philip J. Goulder
Journal: The Journal of Immunology
J Immunol (2015) 194 (11): 5329–5345.
https://doi.org/10.4049/jimmunol.1400854
Published: 01 June 2015
View article titled, CD8<sup>+</sup> TCR Bias and Immunodominance in HIV-1 Infection
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Includes: Supplementary data
Journal Articles

Characterization of functional antiviral CD8 T cell immune responses of HIV elite controllers by high dimensional phenotyping using mass cytometry (VIR6P.1169)

Katja Kleinsteuber, Narges Rashidi, Damien Soghoian, Nzuekoh Nchinda, Orestes Mavrothalassitis, Soren Buus, Tad George, Olga Ornatsky, Bruce Walker
Journal: The Journal of Immunology
J Immunol (2015) 194 (1_Supplement): 149.9.
https://doi.org/10.4049/jimmunol.194.Supp.149.9
Published: 01 May 2015
View article titled, Characterization of functional antiviral CD8 T cell immune responses of HIV elite controllers by high dimensional phenotyping using mass cytometry (VIR6P.1169)
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Journal Articles

CD8+ T Cells Complement Antibodies in Protecting against Yellow Fever Virus

Maria R. Bassi, Michael Kongsgaard, Maria A. Steffensen, Christina Fenger, Michael Rasmussen, Karsten Skjødt, Bente Finsen, Anette Stryhn, Søren Buus, Jan P. Christensen, Allan R. Thomsen
Journal: The Journal of Immunology
J Immunol (2015) 194 (3): 1141–1153.
https://doi.org/10.4049/jimmunol.1402605
Published: 01 February 2015
View article titled, CD8<sup>+</sup> T Cells Complement Antibodies in Protecting against Yellow Fever Virus
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Includes: Supplementary data
Journal Articles

Uncovering the Peptide-Binding Specificities of HLA-C: A General Strategy To Determine the Specificity of Any MHC Class I Molecule

Michael Rasmussen, Mikkel Harndahl, Anette Stryhn, Rachid Boucherma, Lise Lotte Nielsen, François A. Lemonnier, Morten Nielsen, Søren Buus
Journal: The Journal of Immunology
J Immunol (2014) 193 (10): 4790–4802.
https://doi.org/10.4049/jimmunol.1401689
Published: 15 November 2014
View article titled, Uncovering the Peptide-Binding Specificities of HLA-C: A General Strategy To Determine the Specificity of Any MHC Class I Molecule
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Includes: Supplementary data
Journal Articles

Comparison of Vaccine-Induced Effector CD8 T Cell Responses Directed against Self- and Non–Self-Tumor Antigens: Implications for Cancer Immunotherapy

Sara R. Pedersen, Maria R. Sørensen, Søren Buus, Jan P. Christensen, Allan R. Thomsen
Journal: The Journal of Immunology
J Immunol (2013) 191 (7): 3955–3967.
https://doi.org/10.4049/jimmunol.1300555
Published: 01 October 2013
View article titled, Comparison of Vaccine-Induced Effector CD8 T Cell Responses Directed against Self- and Non–Self-Tumor Antigens: Implications for Cancer Immunotherapy
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Includes: Supplementary data
Journal Articles

Tapasin Facilitation of Natural HLA-A and -B Allomorphs Is Strongly Influenced by Peptide Length, Depends on Stability, and Separates Closely Related Allomorphs

Linda Geironson, Camilla Thuring, Mikkel Harndahl, Michael Rasmussen, Søren Buus, Gustav Røder, Kajsa M. Paulsson
Journal: The Journal of Immunology
J Immunol (2013) 191 (7): 3939–3947.
https://doi.org/10.4049/jimmunol.1201741
Published: 01 October 2013
View article titled, Tapasin Facilitation of Natural HLA-A and -B Allomorphs Is Strongly Influenced by Peptide Length, Depends on Stability, and Separates Closely Related Allomorphs
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Includes: Supplementary data
Journal Articles

HLA-A*01:03, HLA-A*24:02, HLA-B*08:01, HLA-B*27:05, HLA-B*35:01, HLA-B*44:02, and HLA-C*07:01 Monochain Transgenic/H-2 Class I Null Mice: Novel Versatile Preclinical Models of Human T Cell Responses

Rachid Boucherma, Hédia Kridane-Miledi, Romain Bouziat, Michael Rasmussen, Tanja Gatard, Francina Langa-Vives, Brigitte Lemercier, Annick Lim, Marion Bérard, Lbachir BenMohamed, Søren Buus, Ronald Rooke, François A. Lemonnier
Journal: The Journal of Immunology
J Immunol (2013) 191 (2): 583–593.
https://doi.org/10.4049/jimmunol.1300483
Published: 15 July 2013
View article titled, HLA-A*01:03, HLA-A*24:02, HLA-B*08:01, HLA-B*27:05, HLA-B*35:01, HLA-B*44:02, and HLA-C*07:01 Monochain Transgenic/H-2 Class I Null Mice: Novel Versatile Preclinical Models of Human T Cell Responses
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Includes: Supplementary data
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From viral genome to specific peptide epitopes: methods for identifying porcine T cell epitopes based on in silico predictions, in vitro identification and ex vivo verification (P6098)

Lasse Pedersen, Michael Rasmussen, Mikkel Harndah, Jared Patch, Morten Nielsen, Soren Buus, William Golde, Gregers Jungersen
Journal: The Journal of Immunology
J Immunol (2013) 190 (1_Supplement): 141.13.
https://doi.org/10.4049/jimmunol.190.Supp.141.13
Published: 01 May 2013
View article titled, From viral genome to specific peptide epitopes: methods for identifying porcine T cell epitopes based on in silico predictions, in vitro identification and ex vivo verification (P6098)
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Naturally processed HLA class I-restricted epitopes inform targets of protective CD8+ T cell-mediated immunity (113.11)

Pavlo Gilchuk, Charles Spencer, Stephanie Conant, Xinnan Niu, John Erickson, Kristi McAfee, Carla Oseroff, Sine Hadrup, Jack Bennink, William Hildebrand, Kathryn Edwards, James Crowe, Jr, John Williams, Søren Buus, Alessandro Sette, Ton Schumacher, Andrew Link, Sebastian Joyce
Journal: The Journal of Immunology
J Immunol (2012) 188 (1_Supplement): 113.11.
https://doi.org/10.4049/jimmunol.188.Supp.113.11
Published: 01 May 2012
View article titled, Naturally processed HLA class I-restricted epitopes inform targets of protective CD8+ T cell-mediated immunity (113.11)
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Large Scale T Cell Epitope Discovery in Yellow Fever Virus (113.12)

Michael Kongsgaard, Anette Stryhn, Søren Buus
Journal: The Journal of Immunology
J Immunol (2012) 188 (1_Supplement): 113.12.
https://doi.org/10.4049/jimmunol.188.Supp.113.12
Published: 01 May 2012
View article titled, Large Scale T Cell Epitope Discovery in Yellow Fever Virus (113.12)
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Describing the Peptide Binding Specificity of HLA-C (106.41)

Michael Rasmussen, Mikkel Harndahl, Morten Nielsen, Søren Buus, Anette Stryhn
Journal: The Journal of Immunology
J Immunol (2012) 188 (1_Supplement): 106.41.
https://doi.org/10.4049/jimmunol.188.Supp.106.41
Published: 01 May 2012
View article titled, Describing the Peptide Binding Specificity of HLA-C (106.41)
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HLA-A*7401–Mediated Control of HIV Viremia Is Independent of Its Linkage Disequilibrium with HLA-B*5703

Philippa C. Matthews, Emily Adland, Jennifer Listgarten, Alasdair Leslie, Nompumelelo Mkhwanazi, Jonathan M. Carlson, Mikkel Harndahl, Anette Stryhn, Rebecca P. Payne, Anthony Ogwu, Kuan-Hsiang Gary Huang, John Frater, Paolo Paioni, Henrik Kloverpris, Pieter Jooste, Dominique Goedhals, Cloete van Vuuren, Dewald Steyn, Lynn Riddell, Fabian Chen, Graz Luzzi, Thambiah Balachandran, Thumbi Ndung’u, Søren Buus, Mary Carrington, Roger Shapiro, David Heckerman, Philip J. R. Goulder
Journal: The Journal of Immunology
J Immunol (2011) 186 (10): 5675–5686.
https://doi.org/10.4049/jimmunol.1003711
Published: 15 May 2011
View article titled, HLA-A*7401–Mediated Control of HIV Viremia Is Independent of Its Linkage Disequilibrium with HLA-B*5703
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Includes: Supplementary data
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Analysis of the cytotoxic T lymphocyte response of MHC-defined swine to foot-and-mouth disease virus (170.14)

Jared Patch, Lasse Pedersen, Mary Kenney, Juan Pacheco, Raisa Glabman, Mital Pandya, Morten Nielsen, Soren Buus, William Golde
Journal: The Journal of Immunology
J Immunol (2011) 186 (1_Supplement): 170.14.
https://doi.org/10.4049/jimmunol.186.Supp.170.14
Published: 01 April 2011
View article titled, Analysis of the cytotoxic T lymphocyte response of MHC-defined swine to foot-and-mouth disease virus (170.14)
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