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Table III.

A combined “1-4-7” algorithm

Selection CriteriaDegenerate Bindersa% of Total Degenerate Bindersχ2 (p)
None 73/384 100 b 
P1-P6 72/259 99 13.0 (<0.005) 
Combined algorithms (90% cutoff value) 67/147 92 67.4 (<0.005) 
Combined algorithms (75% cutoff value) 59/100 81 103.9 (<0.005) 
Selection CriteriaDegenerate Bindersa% of Total Degenerate Bindersχ2 (p)
None 73/384 100 b 
P1-P6 72/259 99 13.0 (<0.005) 
Combined algorithms (90% cutoff value) 67/147 92 67.4 (<0.005) 
Combined algorithms (75% cutoff value) 59/100 81 103.9 (<0.005) 
a

Degenerate binders are defined as peptides binding at least two of the three DRB1*0101, -*0401, and -*0701 molecules with an IC50 of 1 μM or less.

b

Not applicable.

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